Google Results Still Display ?index.php

Hallo!
I am using the latest version of vBSEO RC5 as well as the Sitemap Generator 1.7.
I am using the profile that vBSEO includes, the dotcom one instead of the default.

My question, or problem is while google has picked up my site, and indexes currently 18,000 pages from the forum now, the pages are still showing up without the mod_rewrite working. This would be "forum/showthread.php?p=7037" or "forum/forumdisplay.php?f=21".

As well, vbseo is not showing up majorly in the search for the site... Site:example.com vbseo
My understanding is it would tag the modified pages.

If someone could enlighten me as to my mistakes I would love to fix this problem.

Anyone,
Bueller?

If you don't want to get help from users (you did not posted your website), please open a support ticket.

It can take quite a long time for your old pages to come off the search engines, and for all new pages to show up on the search engines.

Thanks for answering the question!
I heart vBSEO